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[PATCH] fix "Preserve relfilenodes" for pg_largeobject and its index 219+ messages / 3 participants [nested] [flat]
* [PATCH] fix "Preserve relfilenodes" for pg_largeobject and its index @ 2022-07-02 05:48 Justin Pryzby <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Justin Pryzby @ 2022-07-02 05:48 UTC (permalink / raw) An empty table is created by initdb, and the filenode was still pointing to that, so pg_largeobject was empty after binary upgrades. Test like: | ./tmp_install/usr/local/pgsql/bin/initdb --no-sync -D pg15b1.dat -k | ./tmp_install/usr/local/pgsql/bin/postgres -D pg15b1.dat -c logging_collector=no -p 5678 -k /tmp& | psql -h /tmp postgres -p 5678 -c '\lo_import /etc/shells' -c 'VACUUM FULL pg_largeobject' | rm -fr pg15b2.dat && ./tmp_install/usr/local/pgsql/bin/initdb --no-sync -k -D pg15b2.dat && ./tmp_install/usr/local/pgsql/bin/pg_upgrade -d pg15b1.dat -D pg15b2.dat -b ./tmp_install/usr/local/pgsql/bin | ./tmp_install/usr/local/pgsql/bin/postgres -D pg15b2.dat -c logging_collector=no -p 5678 -k /tmp& See also: 9a974cbcba005256a19991203583a94b4f9a21a9 https://www.postgresql.org/message-id/20210601140949.GC22012%40momjian.us https://www.postgresql.org/message-id/20220701231413.GI13040%40telsasoft.com --- src/bin/pg_dump/pg_dump.c | 37 ++++++++------ src/bin/pg_upgrade/relfilenumber.c | 68 +++++++++++++++++++++++--- src/bin/pg_upgrade/t/002_pg_upgrade.pl | 2 + 3 files changed, 86 insertions(+), 21 deletions(-) diff --git a/src/bin/pg_dump/pg_dump.c b/src/bin/pg_dump/pg_dump.c index 227cdca2e2d..06d436f2f34 100644 --- a/src/bin/pg_dump/pg_dump.c +++ b/src/bin/pg_dump/pg_dump.c @@ -3135,7 +3135,7 @@ dumpDatabase(Archive *fout) /* * pg_largeobject comes from the old system intact, so set its - * relfrozenxids and relminmxids. + * relfrozenxids, relminmxids and relfilenode. */ if (dopt->binary_upgrade) { @@ -3143,34 +3143,41 @@ dumpDatabase(Archive *fout) PQExpBuffer loFrozenQry = createPQExpBuffer(); PQExpBuffer loOutQry = createPQExpBuffer(); int i_relfrozenxid, + i_relfilenode, + i_oid, i_relminmxid; /* * pg_largeobject */ if (fout->remoteVersion >= 90300) - appendPQExpBuffer(loFrozenQry, "SELECT relfrozenxid, relminmxid\n" + appendPQExpBuffer(loFrozenQry, "SELECT relfrozenxid, relminmxid, relfilenode, oid\n" "FROM pg_catalog.pg_class\n" - "WHERE oid = %u;\n", - LargeObjectRelationId); + "WHERE oid IN (%u, %u);\n", + LargeObjectRelationId, LargeObjectLOidPNIndexId); else - appendPQExpBuffer(loFrozenQry, "SELECT relfrozenxid, 0 AS relminmxid\n" + appendPQExpBuffer(loFrozenQry, "SELECT relfrozenxid, 0 AS relminmxid, relfilenode, oid\n" "FROM pg_catalog.pg_class\n" - "WHERE oid = %u;\n", - LargeObjectRelationId); + "WHERE oid IN (%u, %u);\n", + LargeObjectRelationId, LargeObjectLOidPNIndexId); - lo_res = ExecuteSqlQueryForSingleRow(fout, loFrozenQry->data); + lo_res = ExecuteSqlQuery(fout, loFrozenQry->data, PGRES_TUPLES_OK); i_relfrozenxid = PQfnumber(lo_res, "relfrozenxid"); i_relminmxid = PQfnumber(lo_res, "relminmxid"); + i_relfilenode = PQfnumber(lo_res, "relfilenode"); + i_oid = PQfnumber(lo_res, "oid"); + + appendPQExpBufferStr(loOutQry, "\n-- For binary upgrade, preserve values for pg_largeobject and its index\n"); + for (int i = 0; i < PQntuples(lo_res); ++i) + appendPQExpBuffer(loOutQry, "UPDATE pg_catalog.pg_class\n" + "SET relfrozenxid = '%u', relminmxid = '%u', relfilenode = '%u'\n" + "WHERE oid = %u;\n", + atooid(PQgetvalue(lo_res, i, i_relfrozenxid)), + atooid(PQgetvalue(lo_res, i, i_relminmxid)), + atooid(PQgetvalue(lo_res, i, i_relfilenode)), + atooid(PQgetvalue(lo_res, i, i_oid))); - appendPQExpBufferStr(loOutQry, "\n-- For binary upgrade, set pg_largeobject relfrozenxid and relminmxid\n"); - appendPQExpBuffer(loOutQry, "UPDATE pg_catalog.pg_class\n" - "SET relfrozenxid = '%u', relminmxid = '%u'\n" - "WHERE oid = %u;\n", - atooid(PQgetvalue(lo_res, 0, i_relfrozenxid)), - atooid(PQgetvalue(lo_res, 0, i_relminmxid)), - LargeObjectRelationId); ArchiveEntry(fout, nilCatalogId, createDumpId(), ARCHIVE_OPTS(.tag = "pg_largeobject", .description = "pg_largeobject", diff --git a/src/bin/pg_upgrade/relfilenumber.c b/src/bin/pg_upgrade/relfilenumber.c index b3ad8209eca..0dd649aa0f5 100644 --- a/src/bin/pg_upgrade/relfilenumber.c +++ b/src/bin/pg_upgrade/relfilenumber.c @@ -13,9 +13,13 @@ #include "access/transam.h" #include "catalog/pg_class_d.h" +#include "catalog/pg_largeobject_d.h" #include "pg_upgrade.h" -static void transfer_single_new_db(FileNameMap *maps, int size, char *old_tablespace); +static void transfer_single_new_db(FileNameMap *maps, int size, char *old_tablespace, + bool *has_lotable, bool *has_loindex); +static void remove_stray_largeobject_files(DbInfo *new_db, bool has_lotable, + bool has_loindex); static void transfer_relfile(FileNameMap *map, const char *suffix, bool vm_must_add_frozenbit); @@ -98,6 +102,8 @@ transfer_all_new_dbs(DbInfoArr *old_db_arr, DbInfoArr *new_db_arr, *new_db = NULL; FileNameMap *mappings; int n_maps; + bool has_lotable = false; + bool has_loindex = false; /* * Advance past any databases that exist in the new cluster but not in @@ -117,22 +123,66 @@ transfer_all_new_dbs(DbInfoArr *old_db_arr, DbInfoArr *new_db_arr, mappings = gen_db_file_maps(old_db, new_db, &n_maps, old_pgdata, new_pgdata); - if (n_maps) - { - transfer_single_new_db(mappings, n_maps, old_tablespace); - } + transfer_single_new_db(mappings, n_maps, old_tablespace, + &has_lotable, &has_loindex); + + /* + * Remove the original pg_largeobject files created by initdb if they + * exist in the new cluster with different relfilenodes. This avoids + * leaving behind stray files unassociated with any relation. + */ + remove_stray_largeobject_files(new_db, has_lotable, has_loindex); + /* We allocate something even for n_maps == 0 */ pg_free(mappings); } } +/* + * If there's no relation in the cluster whose relfilenode is the OID of the + * largeobject table/index, then remove the stray file. It ought to have a + * single segment and fork. + */ +static void +remove_stray_largeobject_files(DbInfo *new_db, bool has_lotable, + bool has_loindex) +{ + char prefix[MAXPGPATH]; + char largeobj_file[MAXPGPATH]; + + if (new_db->db_tablespace[0] != '\0') + snprintf(prefix, sizeof(prefix), "%s/%s/%u", + new_db->db_tablespace, new_cluster.tablespace_suffix, + new_db->db_oid); + else + snprintf(prefix, sizeof(prefix), "%s/base/%u", + new_cluster.pgdata, new_db->db_oid); + + if (!has_lotable) + { + snprintf(largeobj_file, sizeof(largeobj_file), "%s/%u", + prefix, LargeObjectRelationId); + if (unlink(largeobj_file) != 0) + pg_fatal("Unable to remove %s.\n", largeobj_file); + } + + if (!has_loindex) + { + snprintf(largeobj_file, sizeof(largeobj_file), "%s/%u", + prefix, LargeObjectLOidPNIndexId); + if (unlink(largeobj_file) != 0) + pg_fatal("Unable to remove %s.\n", largeobj_file); + } +} + /* * transfer_single_new_db() * * create links for mappings stored in "maps" array. */ static void -transfer_single_new_db(FileNameMap *maps, int size, char *old_tablespace) +transfer_single_new_db(FileNameMap *maps, int size, char *old_tablespace, + bool *has_lotable, bool *has_loindex) { int mapnum; bool vm_must_add_frozenbit = false; @@ -146,6 +196,12 @@ transfer_single_new_db(FileNameMap *maps, int size, char *old_tablespace) for (mapnum = 0; mapnum < size; mapnum++) { + /* Keep track of whether a filenode matches the OID */ + if (maps[mapnum].relfilenumber == LargeObjectRelationId) + *has_lotable = true; + if (maps[mapnum].relfilenumber == LargeObjectLOidPNIndexId) + *has_loindex = true; + if (old_tablespace == NULL || strcmp(maps[mapnum].old_tablespace, old_tablespace) == 0) { diff --git a/src/bin/pg_upgrade/t/002_pg_upgrade.pl b/src/bin/pg_upgrade/t/002_pg_upgrade.pl index 2f9b13bf0ae..9ed48c4e06a 100644 --- a/src/bin/pg_upgrade/t/002_pg_upgrade.pl +++ b/src/bin/pg_upgrade/t/002_pg_upgrade.pl @@ -208,6 +208,8 @@ if (defined($ENV{oldinstall})) } } +$oldnode->safe_psql("regression", "VACUUM FULL pg_largeobject;"); + # In a VPATH build, we'll be started in the source directory, but we want # to run pg_upgrade in the build directory so that any files generated finish # in it, like delete_old_cluster.{sh,bat}. -- 2.17.1 --m+utxuhC6KVTvgNz-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v12 1/3] cpuidex check: Support detecting newer GCC versions defining it in cpuid.h @ 2025-07-27 17:45 Lukas Fittl <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Lukas Fittl @ 2025-07-27 17:45 UTC (permalink / raw) Author: Lukas Fittl <[email protected]> Discussion: https://postgr.es/m/CAP53Pky-BN0Ui+A9no3TsU=GoMTFpxYSWYtp_LVaDH=y69BxNg@mail.gmail.com --- meson.build | 4 ++++ src/port/pg_crc32c_sse42_choose.c | 4 ++-- src/port/pg_popcount_avx512.c | 4 ++-- 3 files changed, 8 insertions(+), 4 deletions(-) diff --git a/meson.build b/meson.build index 395416a6060..007ec30800f 100644 --- a/meson.build +++ b/meson.build @@ -2015,7 +2015,11 @@ if cc.links(''' args: test_c_args) cdata.set('HAVE__GET_CPUID_COUNT', 1) elif cc.links(''' + #if defined(_MSC_VER) #include <intrin.h> + #else + #include <cpuid.h> + #endif int main(int arg, char **argv) { unsigned int exx[4] = {0, 0, 0, 0}; diff --git a/src/port/pg_crc32c_sse42_choose.c b/src/port/pg_crc32c_sse42_choose.c index 74d2421ba2b..750f390bfdf 100644 --- a/src/port/pg_crc32c_sse42_choose.c +++ b/src/port/pg_crc32c_sse42_choose.c @@ -20,11 +20,11 @@ #include "c.h" -#if defined(HAVE__GET_CPUID) || defined(HAVE__GET_CPUID_COUNT) +#if defined(HAVE__GET_CPUID) || defined(HAVE__GET_CPUID_COUNT) || (defined(HAVE__CPUIDEX) && !defined(_MSC_VER)) #include <cpuid.h> #endif -#if defined(HAVE__CPUID) || defined(HAVE__CPUIDEX) +#if defined(HAVE__CPUID) || (defined(HAVE__CPUIDEX) && defined(_MSC_VER)) #include <intrin.h> #endif diff --git a/src/port/pg_popcount_avx512.c b/src/port/pg_popcount_avx512.c index 80c0aee3e73..80d9a372dd7 100644 --- a/src/port/pg_popcount_avx512.c +++ b/src/port/pg_popcount_avx512.c @@ -14,13 +14,13 @@ #ifdef USE_AVX512_POPCNT_WITH_RUNTIME_CHECK -#if defined(HAVE__GET_CPUID) || defined(HAVE__GET_CPUID_COUNT) +#if defined(HAVE__GET_CPUID) || defined(HAVE__GET_CPUID_COUNT) || (defined(HAVE__CPUIDEX) && !defined(_MSC_VER)) #include <cpuid.h> #endif #include <immintrin.h> -#if defined(HAVE__CPUID) || defined(HAVE__CPUIDEX) +#if defined(HAVE__CPUID) || (defined(HAVE__CPUIDEX) && defined(_MSC_VER)) #include <intrin.h> #endif -- 2.47.3 --vtqqtrpooseurzip Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v12-0002-Use-time-stamp-counter-to-measure-time-on-Linux-.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 5/5] Serialize decoded tuples without flattening. @ 2026-02-27 18:01 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-02-27 18:01 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 260 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 114 ++++++-- src/include/commands/cluster.h | 5 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 318 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index db710259eeb..e4de410e733 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2574,6 +2579,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2624,14 +2630,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2642,18 +2640,23 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2822,10 +2825,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2835,6 +2838,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2849,14 +2860,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2868,7 +2872,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2892,18 +2896,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2920,6 +2934,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3030,6 +3045,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3458,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..8e22aeb163b 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,94 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + else + natt_ext = 0; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + pfree(ext_val); + } + list_free(attrs_ext); + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..a32813e8530 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,10 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; - - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; +#endif /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..f84917daca2 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, wich we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/4] Serialize decoded tuples without flattening. @ 2026-03-02 14:30 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-02 14:30 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 116 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 327 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..06cb252ddbd 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,98 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + MemoryContextSwitchTo(oldcxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-=-- ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-05 18:58 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-05 18:58 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index 6c99b65247d..e0dd33b52ed 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2586,6 +2591,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2636,14 +2642,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2654,18 +2652,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2834,10 +2841,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2847,6 +2854,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2861,14 +2876,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2880,7 +2888,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2904,18 +2912,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2932,6 +2950,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3263,15 +3462,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v38-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH v40 3/4] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 122 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 331 insertions(+), 69 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..77e301b7c63 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; - } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); - /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + TupleDesc desc; + Datum *attrs; + bool *isnull; - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); + } + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); + /* ... and the tuple itself. */ + BufFileWrite(file, tuple->t_data, tuple->t_len); + + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --k4rn5ob3nx2ufkij Content-Type: text/x-diff; charset=utf-8 Content-Disposition: attachment; filename="v40-0004-Use-BulkInsertState-when-copying-data-to-the-new.patch" ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-09 10:35 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-09 10:35 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 118 ++++++-- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 329 insertions(+), 67 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dd1a7473cdf..2adce59b0fa 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -35,6 +35,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -287,6 +288,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2587,6 +2592,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2637,14 +2643,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2655,18 +2653,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2835,10 +2842,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2848,6 +2855,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2862,14 +2877,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2881,7 +2889,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2905,18 +2913,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2933,6 +2951,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3042,6 +3061,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3264,15 +3463,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..707940c1127 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -97,9 +97,8 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, dstate = (RepackDecodingState *) ctx->output_writer_private; - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == dstate->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +116,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +131,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +145,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +163,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v39-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/7] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index dcad236bd0a..d89be1b9533 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -286,6 +287,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2619,6 +2624,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2669,14 +2675,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2687,18 +2685,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2867,10 +2874,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2880,6 +2887,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2894,14 +2909,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2913,7 +2921,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2937,18 +2945,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2965,6 +2983,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3074,6 +3093,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3296,15 +3495,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v42-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
* [PATCH 4/5] Serialize decoded tuples without flattening. @ 2026-03-11 14:19 Antonin Houska <[email protected]> 0 siblings, 0 replies; 219+ messages in thread From: Antonin Houska @ 2026-03-11 14:19 UTC (permalink / raw) So far we used to flatten the tuples produced by logical decoding in order to write them to a temporary file. That means that all the TOASTed attributes ended up in a single chunk of memory. The problem is that even if individual attributes do fit into the maximum chunk size (currently 1 GB), the whole tuple is not guaranteed to fit. The flattening might be a problem in the future anyway, since there's an effort to restrict the impact of REPACK (CONCURRENTLY) on the VACUUM xmin horizon. However, as the flattening assumes scans of the TOAST relaation, the less we restrict VACUUM, the more likely it is that the TOAST attributes needed for the flattening won't be available at decoding time. (This patch also removes unnecessary field 'tupdesc' from RepackDecodingState and allocates it in the appropriate memory context.) --- src/backend/commands/cluster.c | 264 +++++++++++++++--- .../pgoutput_repack/pgoutput_repack.c | 123 +++++--- src/include/commands/cluster.h | 6 +- .../expected/repack_toast.out | 1 + .../injection_points/specs/repack_toast.spec | 7 + 5 files changed, 330 insertions(+), 71 deletions(-) diff --git a/src/backend/commands/cluster.c b/src/backend/commands/cluster.c index fe419ef808e..8b5571374d0 100644 --- a/src/backend/commands/cluster.c +++ b/src/backend/commands/cluster.c @@ -33,6 +33,7 @@ #include "postgres.h" #include "access/amapi.h" +#include "access/detoast.h" #include "access/heapam.h" #include "access/multixact.h" #include "access/relscan.h" @@ -285,6 +286,10 @@ static void apply_concurrent_update(Relation rel, HeapTuple tup, IndexInsertState *iistate, TupleTableSlot *index_slot); static void apply_concurrent_delete(Relation rel, HeapTuple tup_target); +static HeapTuple restore_tuple(BufFile *file, Relation relation, + MemoryContext cxt); +static HeapTuple adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt); static HeapTuple find_target_tuple(Relation rel, ChangeDest *dest, HeapTuple tup_key, TupleTableSlot *ident_slot); @@ -2622,6 +2627,7 @@ setup_logical_decoding(Oid relid) LogicalDecodingContext *ctx; NameData slotname; RepackDecodingState *dstate; + MemoryContext oldcxt; /* * REPACK CONCURRENTLY is not allowed in a transaction block, so this @@ -2672,14 +2678,6 @@ setup_logical_decoding(Oid relid) */ ctx->reader->routine.page_read = read_local_xlog_page_no_wait; - /* - * read_local_xlog_page_no_wait() needs to be able to indicate the end of - * WAL. - */ - ctx->reader->private_data = MemoryContextAllocZero(ctx->context, - sizeof(ReadLocalXLogPageNoWaitPrivate)); - - /* Some WAL records should have been read. */ Assert(ctx->reader->EndRecPtr != InvalidXLogRecPtr); @@ -2690,18 +2688,27 @@ setup_logical_decoding(Oid relid) XLByteToSeg(ctx->reader->EndRecPtr, repack_current_segment, wal_segment_size); - dstate = palloc0_object(RepackDecodingState); - dstate->relid = relid; + /* Our private state belongs to the decoding context. */ + oldcxt = MemoryContextSwitchTo(ctx->context); /* - * Tuple descriptor may be needed to flatten a tuple before we write it to - * a file. A copy is needed because the decoding worker invalidates system - * caches before it starts to do the actual work. + * read_local_xlog_page_no_wait() needs to be able to indicate the end of + * WAL. */ - rel = table_open(relid, AccessShareLock); - dstate->tupdesc = CreateTupleDescCopy(RelationGetDescr(rel)); + ctx->reader->private_data = palloc0_object(ReadLocalXLogPageNoWaitPrivate); + dstate = palloc0_object(RepackDecodingState); + MemoryContextSwitchTo(oldcxt); + +#ifdef USE_ASSERT_CHECKING + dstate->relid = relid; +#endif + + dstate->change_cxt = AllocSetContextCreate(ctx->context, + "REPACK - change", + ALLOCSET_DEFAULT_SIZES); /* Avoid logical decoding of other relations. */ + rel = table_open(relid, AccessShareLock); repacked_rel_locator = rel->rd_locator; toastrelid = rel->rd_rel->reltoastrelid; if (OidIsValid(toastrelid)) @@ -2870,10 +2877,10 @@ static void apply_concurrent_changes(BufFile *file, ChangeDest *dest) { char kind; - uint32 t_len; Relation rel = dest->rel; TupleTableSlot *index_slot, *ident_slot; + MemoryContext apply_cxt; HeapTuple tup_old = NULL; /* TupleTableSlot is needed to pass the tuple to ExecInsertIndexTuples(). */ @@ -2883,6 +2890,14 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) /* A slot to fetch tuples from identity index. */ ident_slot = table_slot_create(rel, NULL); + /* + * Use a separate memory context for the tuples and any memory needed to + * process them. + */ + apply_cxt = AllocSetContextCreate(TopTransactionContext, + "REPACK - apply", + ALLOCSET_DEFAULT_SIZES); + while (true) { size_t nread; @@ -2897,14 +2912,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) break; /* Read the tuple. */ - BufFileReadExact(file, &t_len, sizeof(t_len)); - tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); - tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); - BufFileReadExact(file, tup->t_data, t_len); - tup->t_len = t_len; - ItemPointerSetInvalid(&tup->t_self); - tup->t_tableOid = RelationGetRelid(dest->rel); - + tup = restore_tuple(file, rel, apply_cxt); if (kind == CHANGE_UPDATE_OLD) { Assert(tup_old == NULL); @@ -2916,7 +2924,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) apply_concurrent_insert(rel, tup, dest->iistate, index_slot); - pfree(tup); + MemoryContextReset(apply_cxt); } else if (kind == CHANGE_UPDATE_NEW || kind == CHANGE_DELETE) { @@ -2940,18 +2948,28 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) elog(ERROR, "failed to find target tuple"); if (kind == CHANGE_UPDATE_NEW) + { + /* + * If 'tup' contains TOAST pointers, they point to the old + * relation's toast. Copy the corresponding TOAST pointers for + * the new relation from the existing tuple. (The fact that we + * received a TOAST pointer here implies that the attribute + * hasn't changed.) + */ + if (HeapTupleHasExternal(tup)) + tup = adjust_toast_pointers(rel, tup, tup_exist, + apply_cxt); + apply_concurrent_update(rel, tup, tup_exist, dest->iistate, index_slot); + } else apply_concurrent_delete(rel, tup_exist); if (tup_old != NULL) - { - pfree(tup_old); tup_old = NULL; - } - pfree(tup); + MemoryContextReset(apply_cxt); } else elog(ERROR, "unrecognized kind of change: %d", kind); @@ -2968,6 +2986,7 @@ apply_concurrent_changes(BufFile *file, ChangeDest *dest) } /* Cleanup. */ + MemoryContextDelete(apply_cxt); ExecDropSingleTupleTableSlot(index_slot); ExecDropSingleTupleTableSlot(ident_slot); } @@ -3077,6 +3096,186 @@ apply_concurrent_delete(Relation rel, HeapTuple tup_target) pgstat_progress_incr_param(PROGRESS_REPACK_HEAP_TUPLES_DELETED, 1); } +/* + * Read tuple from file and store it in given memory context. + * + * External attributes are stored in separate memory chunks, in order to avoid + * exceeding MaxAllocSize - that could happen if the individual attributes are + * smaller than MaxAllocSize but the whole tuple is bigger. + */ +static HeapTuple +restore_tuple(BufFile *file, Relation relation, MemoryContext cxt) +{ + uint32 t_len; + HeapTuple tup; + MemoryContext oldcxt; + uint32 natt_ext; + List *attrs_ext = NIL; + + oldcxt = MemoryContextSwitchTo(cxt); + + /* First, read the external attributes if there are some. */ + BufFileReadExact(file, &natt_ext, sizeof(natt_ext)); + for (int i = 0; i < natt_ext; i++) + { + alignas(uint32) varlena varhdr; + char *ext_val; + Size ext_val_size; + + /* + * Read the header into properly aligned memory before accessing it. + */ + BufFileReadExact(file, &varhdr, VARHDRSZ); + ext_val_size = VARSIZE_ANY(&varhdr); + ext_val = palloc0(ext_val_size); + memcpy(ext_val, &varhdr, VARHDRSZ); + BufFileReadExact(file, ext_val + VARHDRSZ, ext_val_size - VARHDRSZ); + + attrs_ext = lappend(attrs_ext, ext_val); + } + + /* Read the tuple. */ + BufFileReadExact(file, &t_len, sizeof(t_len)); + tup = (HeapTuple) palloc(HEAPTUPLESIZE + t_len); + tup->t_data = (HeapTupleHeader) ((char *) tup + HEAPTUPLESIZE); + BufFileReadExact(file, tup->t_data, t_len); + tup->t_len = t_len; + ItemPointerSetInvalid(&tup->t_self); + tup->t_tableOid = RelationGetRelid(relation); + + /* + * If there are "external indirect" attributes, make the tuple reference + * them. + */ + if (natt_ext > 0) + { + TupleDesc desc; + Datum *attrs; + bool *isnull; + ListCell *lc; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup, desc, attrs, isnull); + + lc = list_head(attrs_ext); + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer, + *new_datum; + varatt_indirect redirect_pointer; + + /* Find the external attributes, like in store_change(). */ + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull[i]) + continue; + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + if (!VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + continue; + + /* Update the attribute. */ + memset(&redirect_pointer, 0, sizeof(redirect_pointer)); + redirect_pointer.pointer = lfirst(lc); + + new_datum = (varlena *) palloc0(INDIRECT_POINTER_SIZE); + SET_VARTAG_EXTERNAL(new_datum, VARTAG_INDIRECT); + memcpy(VARDATA_EXTERNAL(new_datum), &redirect_pointer, + sizeof(redirect_pointer)); + + attrs[i] = PointerGetDatum(new_datum); + + lc = lnext(attrs_ext, lc); + } + Assert(lc == NULL); + + tup = heap_form_tuple(desc, attrs, isnull); + } + + MemoryContextSwitchTo(oldcxt); + + return tup; +} + +/* + * Copy TOAST pointers from 'tup_src' to 'tup_dst' and return the modified + * 'tup_dst'. Use 'cxt' for all memory allocations. + */ +static HeapTuple +adjust_toast_pointers(Relation relation, HeapTuple tup_dst, + HeapTuple tup_src, MemoryContext cxt) +{ + TupleDesc desc; + Datum *attrs_dst; + bool *isnull_dst; + Datum *attrs_src = NULL; + bool *isnull_src = NULL; + MemoryContext oldcxt; + HeapTuple result; + + oldcxt = MemoryContextSwitchTo(cxt); + + desc = RelationGetDescr(relation); + attrs_dst = palloc0_array(Datum, desc->natts); + isnull_dst = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_dst, desc, attrs_dst, isnull_dst); + + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_dst, + *varlena_src; + + if (attr->attisdropped) + continue; + if (attr->attlen != -1) + continue; + if (isnull_dst[i]) + continue; + + varlena_dst = (varlena *) DatumGetPointer(attrs_dst[i]); + if (!VARATT_IS_EXTERNAL_ONDISK(varlena_dst)) + continue; + + /* + * The first TOAST pointer? The caller can easily check if the tuple + * has external attributes(s) in general, but is not supposed to check + * specifically for TOAST. + */ + if (attrs_src == NULL) + { + attrs_src = palloc0_array(Datum, desc->natts); + isnull_src = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tup_src, desc, attrs_src, isnull_src); + } + + varlena_src = (varlena *) DatumGetPointer(attrs_src[i]); + + /* + * Logical decoding only uses TOAST pointer for attributes that + * haven't changed. + */ + Assert(!isnull_src[i]); + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_src)); + + /* Copy the pointer. */ + memcpy(VARDATA_EXTERNAL(varlena_dst), VARDATA_EXTERNAL(varlena_src), + sizeof(varatt_external)); + } + result = heap_form_tuple(desc, attrs_dst, isnull_dst); + + MemoryContextSwitchTo(oldcxt); + + return result; +} + /* * Find the tuple to be updated or deleted. * @@ -3299,15 +3498,8 @@ free_index_insert_state(IndexInsertState *iistate) static void cleanup_logical_decoding(LogicalDecodingContext *ctx) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - FreeTupleDesc(dstate->tupdesc); FreeDecodingContext(ctx); - ReplicationSlotDropAcquired(); - pfree(dstate); } /* diff --git a/src/backend/replication/pgoutput_repack/pgoutput_repack.c b/src/backend/replication/pgoutput_repack/pgoutput_repack.c index d0c464a98d5..90f3a8975b9 100644 --- a/src/backend/replication/pgoutput_repack/pgoutput_repack.c +++ b/src/backend/replication/pgoutput_repack/pgoutput_repack.c @@ -12,7 +12,7 @@ */ #include "postgres.h" -#include "access/heaptoast.h" +#include "access/detoast.h" #include "commands/cluster.h" #include "replication/snapbuild.h" #include "utils/memutils.h" @@ -28,7 +28,7 @@ static void plugin_commit_txn(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, XLogRecPtr commit_lsn); static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation rel, ReorderBufferChange *change); -static void store_change(LogicalDecodingContext *ctx, +static void store_change(LogicalDecodingContext *ctx, Relation relation, ConcurrentChangeKind kind, HeapTuple tuple); void @@ -93,13 +93,9 @@ static void plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, Relation relation, ReorderBufferChange *change) { - RepackDecodingState *dstate; - - dstate = (RepackDecodingState *) ctx->output_writer_private; - - /* Only interested in one particular relation. */ - if (relation->rd_id != dstate->relid) - return; + /* Changes of other relation should not have been decoded. */ + Assert(RelationGetRelid(relation) == + ((RepackDecodingState *) ctx->output_writer_private)->relid); /* Decode entry depending on its type */ switch (change->action) @@ -117,7 +113,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (newtuple == NULL) elog(ERROR, "incomplete insert info."); - store_change(ctx, CHANGE_INSERT, newtuple); + store_change(ctx, relation, CHANGE_INSERT, newtuple); } break; case REORDER_BUFFER_CHANGE_UPDATE: @@ -132,9 +128,9 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, elog(ERROR, "incomplete update info."); if (oldtuple != NULL) - store_change(ctx, CHANGE_UPDATE_OLD, oldtuple); + store_change(ctx, relation, CHANGE_UPDATE_OLD, oldtuple); - store_change(ctx, CHANGE_UPDATE_NEW, newtuple); + store_change(ctx, relation, CHANGE_UPDATE_NEW, newtuple); } break; case REORDER_BUFFER_CHANGE_DELETE: @@ -146,7 +142,7 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, if (oldtuple == NULL) elog(ERROR, "incomplete delete info."); - store_change(ctx, CHANGE_DELETE, oldtuple); + store_change(ctx, relation, CHANGE_DELETE, oldtuple); } break; default: @@ -164,39 +160,100 @@ plugin_change(LogicalDecodingContext *ctx, ReorderBufferTXN *txn, /* Store concurrent data change. */ static void -store_change(LogicalDecodingContext *ctx, ConcurrentChangeKind kind, - HeapTuple tuple) +store_change(LogicalDecodingContext *ctx, Relation relation, + ConcurrentChangeKind kind, HeapTuple tuple) { RepackDecodingState *dstate; + MemoryContext oldcxt; + BufFile *file; char kind_byte = (char) kind; - bool flattened = false; + List *attrs_ext = NIL; + uint32 natt_ext; dstate = (RepackDecodingState *) ctx->output_writer_private; + file = dstate->file; /* Store the change kind. */ - BufFileWrite(dstate->file, &kind_byte, 1); + BufFileWrite(file, &kind_byte, 1); + + /* Make sure there are no memory leaks. */ + oldcxt = MemoryContextSwitchTo(dstate->change_cxt); /* - * ReorderBufferCommit() stores the TOAST chunks in its private memory - * context and frees them after having called apply_change(). Therefore - * we need flat copy (including TOAST) that we eventually copy into the - * memory context which is available to decode_concurrent_changes(). + * If the tuple contains "external indirect" attributes, we need to write + * the contents to the file because we have no control over that memory. */ if (HeapTupleHasExternal(tuple)) { - /* - * toast_flatten_tuple_to_datum() might be more convenient but we - * don't want the decompression it does. - */ - tuple = toast_flatten_tuple(tuple, dstate->tupdesc); - flattened = true; + TupleDesc desc; + Datum *attrs; + bool *isnull; + + desc = RelationGetDescr(relation); + attrs = palloc0_array(Datum, desc->natts); + isnull = palloc0_array(bool, desc->natts); + + heap_deform_tuple(tuple, desc, attrs, isnull); + + /* First, gather and count the "external indirect" attributes. */ + for (int i = 0; i < desc->natts; i++) + { + CompactAttribute *attr = TupleDescCompactAttr(desc, i); + varlena *varlena_pointer; + + if (attr->attisdropped) + continue; + + /* not a varlena datatype */ + if (attr->attlen != -1) + continue; + + /* no data */ + if (isnull[i]) + continue; + + /* ok, we know we have a toast datum */ + varlena_pointer = (varlena *) DatumGetPointer(attrs[i]); + + if (!VARATT_IS_EXTERNAL(varlena_pointer)) + continue; + + if (VARATT_IS_EXTERNAL_INDIRECT(varlena_pointer)) + attrs_ext = lappend(attrs_ext, varlena_pointer); + else + { + /* + * Logical decoding should not produce "external expanded" + * attributes (those actually should never appear on disk), so + * only TOASTed attribute can be seen here. + */ + Assert(VARATT_IS_EXTERNAL_ONDISK(varlena_pointer)); + } + } + natt_ext = list_length(attrs_ext); } - /* Store the tuple size ... */ - BufFileWrite(dstate->file, &tuple->t_len, sizeof(tuple->t_len)); + else + natt_ext = 0; + + /* Write the number of external attributes. */ + BufFileWrite(file, &natt_ext, sizeof(natt_ext)); + /* ... and the attributes themselves, if there are some. */ + foreach_ptr(varlena, attr_val, attrs_ext) + { + varlena *ext_val; + Size ext_val_size; + + ext_val = detoast_external_attr(attr_val); + ext_val_size = VARSIZE_ANY(ext_val); + BufFileWrite(file, ext_val, ext_val_size); + } + + /* Finally write the tuple size ... */ + BufFileWrite(file, &tuple->t_len, sizeof(tuple->t_len)); /* ... and the tuple itself. */ - BufFileWrite(dstate->file, tuple->t_data, tuple->t_len); + BufFileWrite(file, tuple->t_data, tuple->t_len); - /* Free the flat copy if created above. */ - if (flattened) - pfree(tuple); + /* Cleanup. */ + MemoryContextSwitchTo(oldcxt); + MemoryContextReset(dstate->change_cxt); } diff --git a/src/include/commands/cluster.h b/src/include/commands/cluster.h index 1b05d5d418b..34b7208de9b 100644 --- a/src/include/commands/cluster.h +++ b/src/include/commands/cluster.h @@ -65,11 +65,13 @@ typedef enum */ typedef struct RepackDecodingState { +#ifdef USE_ASSERT_CHECKING /* The relation whose changes we're decoding. */ Oid relid; +#endif - /* Tuple descriptor of the relation being processed. */ - TupleDesc tupdesc; + /* Per-change memory context. */ + MemoryContext change_cxt; /* The current output file. */ BufFile *file; diff --git a/src/test/modules/injection_points/expected/repack_toast.out b/src/test/modules/injection_points/expected/repack_toast.out index 4f866a74e32..b56dde134f8 100644 --- a/src/test/modules/injection_points/expected/repack_toast.out +++ b/src/test/modules/injection_points/expected/repack_toast.out @@ -13,6 +13,7 @@ step change: UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; step check2: INSERT INTO relfilenodes(node) diff --git a/src/test/modules/injection_points/specs/repack_toast.spec b/src/test/modules/injection_points/specs/repack_toast.spec index b48abf21450..b878b198971 100644 --- a/src/test/modules/injection_points/specs/repack_toast.spec +++ b/src/test/modules/injection_points/specs/repack_toast.spec @@ -74,10 +74,17 @@ teardown session s2 step change +# Separately test UPDATE of both plain ("i") and TOASTed ("j") attribute. In +# the first case, the new tuple we get from reorderbuffer.c contains "j" as a +# TOAST pointer, which we need to update so it points to the new heap. In the +# latter case, we receive "j" as "external indirect" value - here we test that +# the decoding worker writes the tuple to a file correctly and that the +# backend executing REPACK manages to restore it. { UPDATE repack_test SET j=get_long_string() where i=2; DELETE FROM repack_test WHERE i=3; INSERT INTO repack_test(i, j) VALUES (4, get_long_string()); + UPDATE repack_test SET i=3 where i=1; } # Check the table from the perspective of s2. step check2 -- 2.47.3 --=-=-= Content-Type: text/x-diff Content-Disposition: attachment; filename=v41-0005-Use-BulkInsertState-when-copying-data-to-the-new-hea.patch ^ permalink raw reply [nested|flat] 219+ messages in thread
end of thread, other threads:[~2026-03-11 14:19 UTC | newest] Thread overview: 219+ messages (download: mbox mbox.gz follow: Atom feed) -- links below jump to the message on this page -- 2022-07-02 05:48 [PATCH] fix "Preserve relfilenodes" for pg_largeobject and its index Justin Pryzby <[email protected]> 2025-07-27 17:45 [PATCH v12 1/3] cpuidex check: Support detecting newer GCC versions defining it in cpuid.h Lukas Fittl <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-02-27 18:01 [PATCH 5/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-02 14:30 [PATCH 4/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-05 18:58 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH v40 3/4] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-09 10:35 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/7] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]> 2026-03-11 14:19 [PATCH 4/5] Serialize decoded tuples without flattening. Antonin Houska <[email protected]>
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